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self-organizing map (som) algorithm  (MathWorks Inc)


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    MathWorks Inc self-organizing map (som) algorithm
    Self Organizing Map (Som) Algorithm, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/self-organizing+map+(som)+algorithm/10__24014_slash_ijaidm__v7i1__28355-140-8-12
    Average 90 stars, based on 1 article reviews
    self-organizing map (som) algorithm - by Bioz Stars, 2026-09
    90/100 stars

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    Modification:

    Article Title: Digital Image Processing to Detect Sumba Woven Fabric Contour Using Gray Level Co-occurrence Matrix and Self Organizing Map
    Article Snippet: The results of the processing of the Self-organizing Map (SOM) algorithm in Matlab have several plots to display the final results, namely SOM Topology, SOM Neighbor Connection, SOM Neighbor Distance, SOM Form Input, SOM Sample Hits, SOM Weight Position of the cluster formed as shown in the figure below this.

    Article Title: Systems analysis of transcriptome and proteome in retinoic acid/arsenic trioxide-induced cell differentiation/apoptosis of promyelocytic leukemia
    Article Snippet: A software package of the self-organizing map (SOM) algorithm, implemented with the matlab 6.5 environment ( www.cis.hut.fi/projects/somtoolbox/ ), was used for SOM training.

    Article Title: Diversity and nest site selection of social wasps along Guianese forest edges: assessing the influence of arboreal ants.
    Article Snippet: We examined 424 nests belonging to 61 wasp species along 5 km of rainforest edges in French Guiana (ca.. 15,235 plants monitored), and estimate that we recorded up to 73% of the local social wasp fauna.. This baseline study was complemented by a long-term survey of the same area and the examination of isolated trees (permitting us to record two additional species, resulting in a total of 63 wasp species).

    Article Title: Integrating Dimension Reduction and Out-of-Sample Extension in Automated Classification of Ex Vivo Human Patellar Cartilage on Phase Contrast X-Ray Computed Tomography
    Article Snippet: A steepest descent procedure is used for minimizing E. The implementation of this algorithm was taken from the self-organizing map (SOM) toolbox for MATLAB [ ]. t-distributed stochastic neighbor embedding (t-SNE) : Stochastic Neighbor Embedding (SNE) converts Euclidean distances between high-dimension texture feature vectors into conditional probabilities representing similarities; the closer the feature vectors, the higher the similarity [ ].

    Article Title: Ant species diversity in the 'Grands Causses' (Aveyron, France): In search of sampling methods adapted to temperate climates.
    Article Snippet: This study aimed at showing the applicability of using a combination of four sampling methods (i.e., Winkler extractors, pitfall traps, baiting and manual collection), something most often conducted in the tropics, to create an inventory of ant species diversity in temperate environments.. We recorded a total of 33 ant species in the Grands Causses by comparing three vegetal formations: a steppic lawn (‘causse’ sensu stricto), which was the most species-rich (29 species), followed by an oak grove (22 species) and a pine forest (17 species).. No sampling method alone is efficient enough to provide an adequate sampling, but their combination permits one to make a suitable inventory of the myrmecofauna and to obtain information on the ecology of these ant species.

    Article Title: A proteomics view on the role of drought-induced senescence and oxidative stress defense in enhanced stem reserves remobilization in wheat.
    Article Snippet: Mitra Mohammadi Bazargani , Elham Sarhadi, Ali-Akbar Shahnejat Bushehri, Andrea Matros, Hans-Peter Mock, Mohammad-Reza Naghavi, Vahid Hajihoseini, Mohsen Mardi, Mohammad-Reza Hajirezaei, Foad Moradi, Bahman Ehdaie , Ghasem Hosseini Salekdeh e,⁎ Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran, Karaj, Iran Department of Agronomy and Plant Breeding, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany Department of Molecular Physiology, Agricultural Biotechnology Research Institute of Iran, Karaj, Iran Department of Molecular Systems Biology, Royan Institute for Stem Cell Biology and Technology, ACCER, Tehran, Iran Department of Botany and Plant Science, University of California, Riverside, CA 92521–0124, USA

    Article Title: High genetic differentiation of grapevine rootstock varieties determined by molecular markers and artificial neural networks
    Article Snippet: The genetic differentiation of grapevine rootstock varieties was inferred by an artificial neural network (ANN) approach of the Self-Organizing Map algorithm (SOM; Kohonen, 1998) in MATLAB (2010).

    Article Title: Identification and validation of novel androgen-regulated genes in prostate cancer.
    Article Snippet: A modified version of the original self-organizing map (SOM) algorithm developed by Kohonen et al. (31), created using the MATLAB toolbox (Mathworks, Natick, MA), was then applied to the standardized expression values to generate a 6 6 matrix of 36 clusters (32).

    Expressing:

    Article Title: Digital Image Processing to Detect Sumba Woven Fabric Contour Using Gray Level Co-occurrence Matrix and Self Organizing Map
    Article Snippet: The results of the processing of the Self-organizing Map (SOM) algorithm in Matlab have several plots to display the final results, namely SOM Topology, SOM Neighbor Connection, SOM Neighbor Distance, SOM Form Input, SOM Sample Hits, SOM Weight Position of the cluster formed as shown in the figure below this.

    Article Title: Systems analysis of transcriptome and proteome in retinoic acid/arsenic trioxide-induced cell differentiation/apoptosis of promyelocytic leukemia
    Article Snippet: A software package of the self-organizing map (SOM) algorithm, implemented with the matlab 6.5 environment ( www.cis.hut.fi/projects/somtoolbox/ ), was used for SOM training.

    Article Title: Diversity and nest site selection of social wasps along Guianese forest edges: assessing the influence of arboreal ants.
    Article Snippet: We examined 424 nests belonging to 61 wasp species along 5 km of rainforest edges in French Guiana (ca.. 15,235 plants monitored), and estimate that we recorded up to 73% of the local social wasp fauna.. This baseline study was complemented by a long-term survey of the same area and the examination of isolated trees (permitting us to record two additional species, resulting in a total of 63 wasp species).

    Article Title: Integrating Dimension Reduction and Out-of-Sample Extension in Automated Classification of Ex Vivo Human Patellar Cartilage on Phase Contrast X-Ray Computed Tomography
    Article Snippet: A steepest descent procedure is used for minimizing E. The implementation of this algorithm was taken from the self-organizing map (SOM) toolbox for MATLAB [ ]. t-distributed stochastic neighbor embedding (t-SNE) : Stochastic Neighbor Embedding (SNE) converts Euclidean distances between high-dimension texture feature vectors into conditional probabilities representing similarities; the closer the feature vectors, the higher the similarity [ ].

    Article Title: Ant species diversity in the 'Grands Causses' (Aveyron, France): In search of sampling methods adapted to temperate climates.
    Article Snippet: This study aimed at showing the applicability of using a combination of four sampling methods (i.e., Winkler extractors, pitfall traps, baiting and manual collection), something most often conducted in the tropics, to create an inventory of ant species diversity in temperate environments.. We recorded a total of 33 ant species in the Grands Causses by comparing three vegetal formations: a steppic lawn (‘causse’ sensu stricto), which was the most species-rich (29 species), followed by an oak grove (22 species) and a pine forest (17 species).. No sampling method alone is efficient enough to provide an adequate sampling, but their combination permits one to make a suitable inventory of the myrmecofauna and to obtain information on the ecology of these ant species.

    Article Title: A proteomics view on the role of drought-induced senescence and oxidative stress defense in enhanced stem reserves remobilization in wheat.
    Article Snippet: Mitra Mohammadi Bazargani , Elham Sarhadi, Ali-Akbar Shahnejat Bushehri, Andrea Matros, Hans-Peter Mock, Mohammad-Reza Naghavi, Vahid Hajihoseini, Mohsen Mardi, Mohammad-Reza Hajirezaei, Foad Moradi, Bahman Ehdaie , Ghasem Hosseini Salekdeh e,⁎ Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran, Karaj, Iran Department of Agronomy and Plant Breeding, College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany Department of Molecular Physiology, Agricultural Biotechnology Research Institute of Iran, Karaj, Iran Department of Molecular Systems Biology, Royan Institute for Stem Cell Biology and Technology, ACCER, Tehran, Iran Department of Botany and Plant Science, University of California, Riverside, CA 92521–0124, USA

    Article Title: High genetic differentiation of grapevine rootstock varieties determined by molecular markers and artificial neural networks
    Article Snippet: The genetic differentiation of grapevine rootstock varieties was inferred by an artificial neural network (ANN) approach of the Self-Organizing Map algorithm (SOM; Kohonen, 1998) in MATLAB (2010).

    Article Title: Identification and validation of novel androgen-regulated genes in prostate cancer.
    Article Snippet: A modified version of the original self-organizing map (SOM) algorithm developed by Kohonen et al. (31), created using the MATLAB toolbox (Mathworks, Natick, MA), was then applied to the standardized expression values to generate a 6 6 matrix of 36 clusters (32).



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